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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015831229.1_cds_XP_016504424.1_17869
CDS Infomation

[gene=LOC107822401] [db_xref=GeneID:107822401] [protein=protein NRT1/ PTR FAMILY 4.5-like] [protein_id=XP_016504424.1] [location=complement(join(26595..27471,27547..28118,28225..28442,28837..28915,29017..29019))] [gbkey=CDS]
Sequence

ATGGGAATTTGCAGAGATACCCAGACTGAACCAAAGCAACTACCAAGCAAGGGGGGAACT
AGAGCAACTCTTTTTGTGTATGCTGTGGCAGGGATTGATACCATGGCTTTTATTTCAAAT
GGTGTGAGCCTGGTGACTTACTTCTATGGTTATATGAACTTCAGCTTGATAAAATCTGCC
ACTACTGTCACAAACTTCATGGGAACTGCATTCTTGCTCTCACTATTTGGAGCCTTTCTC
TCAGATACTTACTTCTCCAGATTCAAGACTTGTGTTCTCTTTGGCAGCATTCAAGTCTTG
GGATATGCACTTCTAGCTGTTCAAGCACATTTCAGCCAACTGAGACCATTTCCCTGCAAG
AATGTACCCTTAAGCCTAAGCAATCAATGTGAATCTGCAGATACAGGCCAATTGGCAATC
TTGTATGGAGGCATTTATCTAATAGCACTCGGAAACAGTGGAGTTAAAGCAGCTTTGCCA
TCTTTGGGTGCTGATCAATTTGATGAAAAGGATCCCAAAGGGGTTGCAAAATTATCAAGT
TACTTCAATTGGCTACTGTTCTGCATCACCGTTGGAGCAATGCTTGGTGTTACATTTTTT
GTCTGGATAAGTGATAGCCAAGGATGGGATTGGTCTTTTGGTGTCTGCTGTGTAGCAGTT
GGTTTAGCAATCCTGCTCTTAACCATGGGAAAACCATTTTATAGAAACAACATTCCTAAA
GGAAGCCCTCTTATGCGTATCGCGCAGGTTTTTGTTGCAGCTTTTACAAACAGAAATCTC
CCACTACCACAAAACAAAGAAGATTTATATCAGATCAAGAGTAGAGAACCTGAAAATGAA
ACTGAGATTCTTCAAAGGACTGATCAATTCAAATTTTTGGACAGGGCAGCCATACTGAGG
ACCAAACAAGAAGCATCTACATCAAGTGCACATGGACAATGGAGCCTCTGTACCATCTCA
CAAGTTGAAGAAACAAAGATTGTAGTCCGAATGCTCCCAATAATATTGAGCACTGTCTTC
ATGAACACTTGTATGGCTCAACTCCAGACCTTCACTATTCAACAAAGTCTAACAATGAAC
AGAAAAATCCGAAACTTTGAAATCCCAGGGCCTTCAATACCTATAATTCCACAATTGTTC
CAACTCTTCCTGATCCCAGTCTATGATCGAATTTTCATTCCAATAGCAAGAAAATTTACA
GGGATCCCTTCTGGGATTCGACAACTCCAACGTATAGGTGTTGGACTAGTACTTACAGCG
GTTTCTATGGCAGTAGCTGCAGTTGTAGAAAGTCACAGGAAATCAGTTGCCATTGAGCAA
AACATGGTTGATTCAGCCAGTCCATTACCTATGAGTGTGTTCTGGCTCGGATACCAATAT
GTAATATTTGCAACAGCTGAAATATTTACATTGGTGGGGTTGCTTGATTTCTTTTATGCA
GAGAGCACATCAGGCATGAAATCACTGAGTATGGCCATTTCTTGGTCTTCTCTGGCATTT
GGGTACTTCACAAGCTCATTGGTGGTGAGTGTAATTAACAAGGTGAGTGGTGGCTGGTTA
GCTAATAACAACTTGAACAGAGACAAGCTCGACTACTTCTATTGGTTGCTAGCAGGAGTC
AGTGTGCTGAACTTTGGGTTTTATTTACTGTGTGCATCTTGGTATAAGTATAAGAAGCTA
GAACTGAATCCAGAAGATGCTACCTCTGACAAGAAGGCCAAGGGGAAAATGGAAACATGT
ATCGTTTAA

Peptide Sequence

PEP ID

XP_016504424.1
PEP Infomation

PREDICTED: protein NRT1/ PTR FAMILY 4.5-like [Nicotiana tabacum]
Sequence

MGICRDTQTEPKQLPSKGGTRATLFVYAVAGIDTMAFISNGVSLVTYFYGYMNFSLIKSA
TTVTNFMGTAFLLSLFGAFLSDTYFSRFKTCVLFGSIQVLGYALLAVQAHFSQLRPFPCK
NVPLSLSNQCESADTGQLAILYGGIYLIALGNSGVKAALPSLGADQFDEKDPKGVAKLSS
YFNWLLFCITVGAMLGVTFFVWISDSQGWDWSFGVCCVAVGLAILLLTMGKPFYRNNIPK
GSPLMRIAQVFVAAFTNRNLPLPQNKEDLYQIKSREPENETEILQRTDQFKFLDRAAILR
TKQEASTSSAHGQWSLCTISQVEETKIVVRMLPIILSTVFMNTCMAQLQTFTIQQSLTMN
RKIRNFEIPGPSIPIIPQLFQLFLIPVYDRIFIPIARKFTGIPSGIRQLQRIGVGLVLTA
VSMAVAAVVESHRKSVAIEQNMVDSASPLPMSVFWLGYQYVIFATAEIFTLVGLLDFFYA
ESTSGMKSLSMAISWSSLAFGYFTSSLVVSVINKVSGGWLANNNLNRDKLDYFYWLLAGV
SVLNFGFYLLCASWYKYKKLELNPEDATSDKKAKGKMETCIV

Transcript Sequence

Gene sequence data has not been registered.